Zm00001d021057 (GRMZM2G097059)


Aliases : GRMZM2G097059

Description : 27.3.24 RNA.regulation of transcription.MADS box transcription factor family Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif. SEPALLATA3 (SEP3)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d021057
Cluster HCCA cluster: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT2G45650 AGL6 AGAMOUS-like 6 0.02 Gene family
AT5G65070 FCL4, AGL69, MAF4 K-box region and MADS-box transcription factor family protein 0.02 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.05 Gene family
GSVIVT01008140001 No alias 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
GSVIVT01012110001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01012250001 No alias 33.99 development.unspecified Floral homeotic gene... 0.06 Gene family
GSVIVT01018450001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.07 Gene family
GSVIVT01021303001 No alias 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
GSVIVT01022182001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01025945001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01026207001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01027577001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01033253001 No alias No description available 0.02 Gene family
GSVIVT01035477001 No alias 33.99 development.unspecified Encodes a member of the... 0.04 Gene family
LOC_Os01g10504 Os01g0201700 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os01g66290 Os01g0886200 33.99 development.unspecified AGAMOUS [AG]-like MADS box... 0.03 Gene family
LOC_Os02g45770 Os02g0682200 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os03g11614 Os03g0215400 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
LOC_Os04g49150 Os04g0580700 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os05g11380 No alias 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
LOC_Os05g11414 Os05g0203800 33.99 development.unspecified Floral homeotic gene... 0.04 Gene family
LOC_Os06g06750 Os06g0162800 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os06g11330 Os06g0217300 33.99 development.unspecified Encodes a nuclear protein... 0.03 Gene family
LOC_Os07g01820 Os07g0108900 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
LOC_Os07g41370 Os07g0605200 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
LOC_Os08g41950 Os08g0531700 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
LOC_Os09g02780 Os09g0116000 No description available 0.02 Gene family
LOC_Os12g10540 Os12g0207000 33.99 development.unspecified AGAMOUS [AG]-like MADS box... 0.03 Gene family
MA_211156g0010 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
MA_35712g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_69370g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Smo121275 PACid_15416177 No description available 0.02 Gene family
Solyc02g065730.2.1 Solyc02g065730.2 33.99 development.unspecified MADS box gene negatively... 0.03 Gene family
Solyc02g091550.2.1 Solyc02g091550.2 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc03g006830.3.1 Solyc03g006830.3 No description available 0.03 Gene family
Solyc06g035560.2.1 Solyc06g035560.2 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Solyc10g017630.2.1 Solyc10g017630.2 No description available 0.02 Gene family
Zm00001d016957 GRMZM2G316366,... 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Zm00001d039080 GRMZM5G891280 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 86 177
IPR002100 TF_MADSbox 10 57
No external refs found!