LOC_Os09g17770.1


Description : RNA polymerase-IV-positioning factor (SHH). transcription factor (SAWADEE)


Gene families : OG_01_0002006 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002006_tree ,
OG_02_0001458 (LandPlants) Phylogenetic Tree(s): OG_02_0001458_tree ,
OG_03_0001429 (SeedPlants) Phylogenetic Tree(s): OG_03_0001429_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g17770.1
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
AT1G15215 No alias BEST Arabidopsis thaliana protein match is:... 0.03 Archaeplastida
MA_8542859g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e033896_P001 No alias RNA polymerase-IV-positioning factor (SHH).... 0.03 Archaeplastida
MA_10426813g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_8542859g0010 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e033896_P001 No alias RNA polymerase-IV-positioning factor (SHH).... 0.03 LandPlants
GSVIVT01014258001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 SeedPlants
MA_10426813g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_8542859g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e033896_P001 No alias RNA polymerase-IV-positioning factor (SHH).... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 136 262
No external refs found!