1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d020827

Zm00001d020827 (GRMZM5G813217)


Aliases : GRMZM5G813217

Description : 20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. CR88


Gene families : OG_01_0000390 (Gene family) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d020827
Cluster HCCA cluster: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT5G52640 HSP81-1, HSP83,... heat shock protein 90.1 0.11 Gene family
AT5G56010 HSP81-3,... heat shock protein 81-3 0.14 Gene family
AT5G56030 HSP81-2, ERD8,... heat shock protein 81-2 0.15 Gene family
Cpa|evm.model.tig00000989.4 No alias 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.06 Gene family
Cpa|evm.model.tig00021126.11 No alias 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.02 Gene family
Cre02.g080650 No alias 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.07 Gene family
Cre09.g386750 No alias No description available 0.1 Gene family
Cre12.g514850 No alias 20.2.1 stress.abiotic.heat Encodes a... 0.1 Gene family
GSVIVT01003469001 No alias No description available 0.05 Gene family
GSVIVT01019407001 No alias 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.13 Gene family
GSVIVT01028856001 No alias 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.11 Gene family
GSVIVT01030056001 No alias 20.2.1 stress.abiotic.heat HEAT SHOCK PROTEIN 89.1 (Hsp89.1) 0.05 Gene family
LOC_Os04g01740 Os04g0107900 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.22 Gene family
LOC_Os06g50300 Os06g0716700 20.2.1 stress.abiotic.heat encodes an ortholog of GRP94,... 0.05 Gene family
LOC_Os08g39140 Os08g0500700 No description available 0.24 Gene family
LOC_Os09g29840 Os09g0474300 20.2.1 stress.abiotic.heat Encodes a... 0.1 Gene family
LOC_Os09g30412 Os09g0482100 No description available 0.02 Gene family
LOC_Os09g30418 Os09g0482550,... No description available 0.07 Gene family
LOC_Os12g32986 Os12g0514500 20.2.1 stress.abiotic.heat HEAT SHOCK PROTEIN 89.1 (Hsp89.1) 0.23 Gene family
MA_10434030g0010 No alias 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.02 Gene family
MA_10861g0010 No alias 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.02 Gene family
Smo151384 PACid_15416223 No description available 0.11 Gene family
Smo267300 PACid_15410445 No description available 0.14 Gene family
Smo271484 PACid_15423219 No description available 0.14 Gene family
Smo440901 PACid_15408618 No description available 0.02 Gene family
Solyc03g007890.3.1 Solyc03g007890.3 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.16 Gene family
Solyc06g036290.3.1 Solyc06g036290.3 20.2.1 stress.abiotic.heat Encodes a cytosolic heat... 0.2 Gene family
Solyc07g047790.3.1 Solyc07g047790.3 20.2.1 stress.abiotic.heat HEAT SHOCK PROTEIN 89.1 (Hsp89.1) 0.03 Gene family
Solyc07g065840.2.1 Solyc07g065840.2 No description available 0.02 Gene family
Solyc12g015880.2.1 Solyc12g015880.2 No description available 0.01 Gene family
Zm00001d006008 GRMZM2G112165 No description available 0.03 Gene family
Zm00001d052809 GRMZM2G002220 20.2.1 stress.abiotic.heat Encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006457 protein folding IEA InterProScan
MF GO:0051082 unfolded protein binding IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003594 HATPase_C 101 260
IPR001404 Hsp90_fam 265 766
No external refs found!