Zm00001d020804 (GRMZM2G056600)


Aliases : GRMZM2G056600

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d020804
Cluster HCCA cluster: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AT1G27045 No alias Homeobox-leucine zipper protein family 0.03 Gene family
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.02 Gene family
AT5G03790 HB51, ATHB51, LMI1 homeobox 51 0.04 Gene family
LOC_Os02g43330 Os02g0649300 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os04g45810 Os04g0541700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os09g21180 Os09g0379600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
MA_12053g0010 No alias No description available 0.03 Gene family
Smo18217 PACid_15421310 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Smo19476 PACid_15403593 No description available 0.04 Gene family
Solyc04g005800.3.1 Solyc04g005800.3 No description available 0.06 Gene family
Solyc11g010270.2.1 Solyc11g010270.2 No description available 0.02 Gene family
Zm00001d032316 GRMZM2G003304 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d048227 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 48 101
IPR003106 Leu_zip_homeo 103 144
No external refs found!