Zm00001d020799 (GRMZM2G150796)

Aliases : GRMZM2G150796

Description : major CHO metabolism.degradation.starch.ISA3 Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic &#945-amylase AMY3 is upregulated. isoamylase 3 (ISA3)

Gene families : OG_01_0001188 (Gene family) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d020799
Cluster HCCA cluster: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
AT1G03310 DBE1, ATISA2, BE2, ISA2 debranching enzyme 1 0.03 Gene family
AT2G39930 ATISA1, ISA1 isoamylase 1 0.02 Gene family
AT4G09020 ATISA3, ISA3 isoamylase 3 0.03 Gene family
Cre03.g155001 No alias major CHO... 0.02 Gene family
Cre03.g207713 No alias major CHO metabolism.degradation.starch.ISA3... 0.04 Gene family
Solyc07g014590.3.1 Solyc07g014590.3 major CHO... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 21 117
IPR006047 Glyco_hydro_13_cat_dom 188 305
No external refs found!