Zm00001d020789 (GRMZM2G082653)


Aliases : GRMZM2G082653

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes CNI1 (Carbon/Nitrogen Insensitive1) (also named as ATL31), a RING type ubiquitin ligase that functions in the Carbon/Nitrogen response for growth phase transition in Arabidopsis seedlings.


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d020789
Cluster HCCA cluster: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT1G04360 No alias RING/U-box superfamily protein 0.03 Gene family
AT1G35330 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G72200 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G72220 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G35910 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G42350 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.04 Gene family
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Gene family
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.02 Gene family
AT3G60966 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G09100 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G15975 No alias RING/U-box superfamily protein 0.05 Gene family
AT4G33565 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.03 Gene family
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.03 Gene family
Cpa|evm.model.tig00020629.137 No alias No description available 0.01 Gene family
GSVIVT01000015001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01008754001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01009096001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01016564001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01020665001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
GSVIVT01026703001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01027769001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os01g11500 Os01g0213100 No description available 0.01 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.04 Gene family
LOC_Os01g53500 Os01g0736600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os02g35347 Os02g0561800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g35440 Os02g0561900 No description available 0.03 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g49710 No alias No description available 0.02 Gene family
LOC_Os02g52210 Os02g0759400 No description available 0.03 Gene family
LOC_Os03g05570 Os03g0149800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os03g44636 Os03g0648600 No description available 0.07 Gene family
LOC_Os03g44642 No alias No description available 0.01 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.08 Gene family
LOC_Os04g49700 Os04g0586700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os05g11860 No alias No description available 0.02 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os06g11450 Os06g0218300 No description available 0.03 Gene family
LOC_Os06g16060 Os06g0271600 No description available 0.03 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.04 Gene family
LOC_Os06g34560 Os06g0536466,... No description available 0.06 Gene family
LOC_Os06g34650 Os06g0537600 No description available 0.01 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.01 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os08g44950 Os08g0563500 No description available 0.03 Gene family
LOC_Os09g29310 Os09g0468300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os10g39770 Os10g0544600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os10g41660 Os10g0566400 No description available 0.01 Gene family
LOC_Os12g24490 Os12g0432600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.04 Gene family
MA_10244600g0010 No alias No description available 0.02 Gene family
MA_10260361g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_1115518g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_114175g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_222729g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_55185g0010 No alias No description available 0.01 Gene family
MA_80729g0030 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_96368g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_9989900g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo412606 PACid_15413010 No description available 0.01 Gene family
Smo59303 PACid_15409233 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc00g007220.3.1 Solyc00g007220.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc00g217960.1.1 Solyc00g217960.1 No description available 0.02 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g100095.1.1 Solyc01g100095.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc01g100100.3.1 Solyc01g100100.3 No description available 0.02 Gene family
Solyc03g112340.1.1 Solyc03g112340.1 No description available 0.02 Gene family
Solyc03g114190.1.1 Solyc03g114190.1 No description available 0.03 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc04g074790.2.1 Solyc04g074790.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc04g074820.2.1 Solyc04g074820.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc09g066300.2.1 Solyc09g066300.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc09g089890.1.1 Solyc09g089890.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc10g011880.1.1 Solyc10g011880.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g081780.2.1 Solyc10g081780.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g081790.1.1 Solyc10g081790.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Solyc12g055710.1.1 Solyc12g055710.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc12g094690.1.1 Solyc12g094690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Zm00001d000390 GRMZM2G312078 No description available 0.04 Gene family
Zm00001d002535 GRMZM2G146847 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d014949 GRMZM2G053707 No description available 0.02 Gene family
Zm00001d017645 GRMZM2G057789 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.04 Gene family
Zm00001d017923 No alias No description available 0.04 Gene family
Zm00001d026021 GRMZM2G031280 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.01 Gene family
Zm00001d029763 GRMZM2G083382 No description available 0.03 Gene family
Zm00001d031100 No alias No description available 0.03 Gene family
Zm00001d031880 No alias No description available 0.04 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.03 Gene family
Zm00001d047068 GRMZM2G368765 No description available 0.03 Gene family
Zm00001d051894 GRMZM2G146228 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d052268 GRMZM2G080079 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 123 166
No external refs found!