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Aliases : AFB2
Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none
Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g04857 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g03800 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g24321 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07454 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G096900.1 | AFB2, Ceric.01G096900 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G069600.1 | COI1, Ceric.11G069600 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G069800.1 | COI1, Ceric.11G069800 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g01640 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01003183001 | TIR1 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009126001 | AFB5 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023363001 | No alias | Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g52230.1 | AFB5, LOC_Os02g52230 | component TIR1/AFB of auxin receptor complex. component... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03379 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g26590.1 | COI1 | component COI of jasmonic acid receptor complex | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01206 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g07224 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20969 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20970 | COI1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05252 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019379 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo168175 | AFB2 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Smo75487 | AFB1, ATGRH1, GRH1 | Phytohormones.jasmonic acid.perception and signal... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g28126 | COI1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e001167_P003 | COI1, Zm00001e001167 | component COI of jasmonic acid receptor complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e026935_P001 | COI1, Zm00001e026935 | component COI of jasmonic acid receptor complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| No external refs found! |