Zm00001d020495 (GRMZM2G169149)

Aliases : GRMZM2G169149

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. WRKY DNA-binding protein 40 (WRKY40)

Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Zm00001d020495
Cluster	HCCA cluster: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.03	Gene family
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.03	Gene family
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.02	Gene family
AT1G66600	ABO3, WRKY63, ATWRKY63	ABA overly sensitive mutant 3	0.03	Gene family
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.02	Gene family
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.04	Gene family
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.03	Gene family
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.04	Gene family
AT3G01080	ATWRKY58, WRKY58	WRKY DNA-binding protein 58	0.03	Gene family
AT3G56400	ATWRKY70, WRKY70	WRKY DNA-binding protein 70	0.04	Gene family
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.04	Gene family
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.05	Gene family
GSVIVT01020060001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
GSVIVT01021252001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
GSVIVT01028244001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01029265001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01030174001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
GSVIVT01033188001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01033194001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01035426001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01035884001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
GSVIVT01035885001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g18584	Os01g0289600	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g43650	Os01g0626400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os01g46800	Os01g0656400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os01g53040	Os01g0730700	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
LOC_Os01g60520	Os01g0820700	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g61080	Os01g0826400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
LOC_Os02g16540	Os02g0265200	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os02g47060	Os02g0698800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os02g53100	Os02g0770500	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os03g21710	Os03g0335200	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os03g55080	Os03g0758000,...	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os03g63810	Os03g0855100	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
LOC_Os05g04640	Os05g0137500	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os05g25770	Os05g0322900	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os05g39720	Os05g0474800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os08g29660	Os08g0386200	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
LOC_Os09g16510	Os09g0334500	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os09g25060	Os09g0417600	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os11g02480	Os11g0116900	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_10428091g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.01	Gene family
MA_10432362g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_10436051g0010	No alias	No description available	0.01	Gene family
MA_20468g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
MA_212937g0010	No alias	No description available	0.02	Gene family
MA_2290g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
MA_52928g0010	No alias	No description available	0.03	Gene family
MA_53351g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_54954g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_65782g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
MA_74833g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Smo77979	PACid_15422458	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc01g095100.3.1	Solyc01g095100.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc03g007380.2.1	Solyc03g007380.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc04g051690.3.1	Solyc04g051690.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc05g007110.2.1	Solyc05g007110.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc05g012770.3.1	Solyc05g012770.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc06g048870.2.1	Solyc06g048870.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc06g066370.3.1	Solyc06g066370.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc06g070990.3.1	Solyc06g070990.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc08g006320.3.1	Solyc08g006320.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc08g008277.1.1	Solyc08g008277.1	No description available	0.03	Gene family
Solyc08g062490.3.1	Solyc08g062490.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc08g067340.3.1	Solyc08g067340.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc09g014990.3.1	Solyc09g014990.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d009619	GRMZM2G063880	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d009939	GRMZM2G057116	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d037607	GRMZM2G163054	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d040554	GRMZM2G327349	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
Zm00001d043569	GRMZM2G040298	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d049173	GRMZM2G054125	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d053369	GRMZM2G038158	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	103	160

External Links

No external refs found!

Zm00001d020495 (GRMZM2G169149)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation