Zm00001d020358 (GRMZM2G100090)


Aliases : GRMZM2G100090

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein with ARM repeat domain


Gene families : OG_01_0002750 (Gene family) Phylogenetic Tree(s): OG0002750_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d020358
Cluster HCCA cluster: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g21740 Os09g0386200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo90666 PACid_15414232 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc03g113870.1.1 Solyc03g113870.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d044773 GRMZM2G406758 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000225 Armadillo 284 323
IPR003613 Ubox_domain 49 115
No external refs found!