LOC_Os09g10200.1


Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes


Gene families : OG_01_0000418 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000418_tree ,
OG_02_0000338 (LandPlants) Phylogenetic Tree(s): OG_02_0000338_tree ,
OG_03_0018331 (SeedPlants) Phylogenetic Tree(s): OG_03_0018331_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g10200.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT2G03190 ASK16, SK16 SKP1-like 16 0.02 Archaeplastida
AT2G20160 MEO, ASK17 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 0.02 Archaeplastida
AT2G25700 ASK3, SK3 SKP1-like 3 0.01 Archaeplastida
AT3G21830 SK8, ASK8 SKP1-like 8 0.02 Archaeplastida
LOC_Os07g05150.1 No alias target protein binding component SKP1/ASK1 of... 0.01 Archaeplastida
LOC_Os07g43180.1 No alias target protein binding component SKP1/ASK1 of... 0.01 Archaeplastida
Solyc11g008400.2.1 No alias target protein binding component SKP1/ASK1 of... 0.01 Archaeplastida
Zm00001e011287_P001 No alias target protein binding component SKP1/ASK1 of... 0.01 Archaeplastida
Zm00001e011288_P001 No alias target protein binding component SKP1/ASK1 of... 0.01 Archaeplastida
Zm00001e020534_P002 No alias target protein binding component SKP1/ASK1 of... 0.01 Archaeplastida
Zm00001e042493_P001 No alias target protein binding component SKP1/ASK1 of... 0.01 Archaeplastida
LOC_Os07g05150.1 No alias target protein binding component SKP1/ASK1 of... 0.01 LandPlants
Zm00001e011287_P001 No alias target protein binding component SKP1/ASK1 of... 0.01 LandPlants
Zm00001e011288_P001 No alias target protein binding component SKP1/ASK1 of... 0.01 LandPlants
Zm00001e020534_P002 No alias target protein binding component SKP1/ASK1 of... 0.01 LandPlants
Zm00001e042493_P001 No alias target protein binding component SKP1/ASK1 of... 0.01 LandPlants
LOC_Os07g05150.1 No alias target protein binding component SKP1/ASK1 of... 0.01 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 14 72
IPR016072 Skp1_comp_dimer 118 164
No external refs found!