Zm00001d020230 (GRMZM2G142740)


Aliases : GRMZM2G142740

Description : 35.2 not assigned.unknown CRS1 / YhbY (CRM) domain-containing protein


Gene families : OG_01_0000682 (Gene family) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d020230
Cluster HCCA cluster: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT3G01370 ATCFM2, CFM2 CRM family member 2 0.07 Gene family
AT3G18390 EMB1865 CRS1 / YhbY (CRM) domain-containing protein 0.07 Gene family
AT3G23070 ATCFM3A, CFM3A CRM family member 3A 0.11 Gene family
AT4G29750 No alias CRS1 / YhbY (CRM) domain-containing protein 0.07 Gene family
AT5G16180 ATCRS1, CRS1 ortholog of maize chloroplast splicing factor CRS1 0.03 Gene family
Cre14.g630301 No alias No description available 0.02 Gene family
GSVIVT01008296001 No alias 33.99 development.unspecified embryo defective 1865 (EMB1865) 0.07 Gene family
GSVIVT01015193001 No alias No description available 0.04 Gene family
GSVIVT01018109001 No alias 35.2 not assigned.unknown Encodes a CRM domain protein... 0.05 Gene family
GSVIVT01031001001 No alias 27.1.1 RNA.processing.splicing ortholog of maize... 0.1 Gene family
GSVIVT01032542001 No alias 35.2 not assigned.unknown Encodes a protein containing a... 0.09 Gene family
LOC_Os04g39060 Os04g0464800 35.2 not assigned.unknown Encodes a protein containing a... 0.11 Gene family
LOC_Os05g47850 Os05g0551900 33.99 development.unspecified embryo defective 1865 (EMB1865) 0.07 Gene family
LOC_Os08g27150 Os08g0360100 27.1.1 RNA.processing.splicing ortholog of maize... 0.02 Gene family
LOC_Os09g19850 Os09g0363100 35.2 not assigned.unknown CRS1 / YhbY (CRM)... 0.07 Gene family
LOC_Os11g37990 Os11g0592400 35.2 not assigned.unknown Encodes a CRM domain protein... 0.04 Gene family
MA_10432072g0010 No alias 35.2 not assigned.unknown Encodes a CRM domain protein... 0.06 Gene family
MA_10435740g0010 No alias 33.99 development.unspecified embryo defective 1865 (EMB1865) 0.04 Gene family
MA_130902g0010 No alias 35.2 not assigned.unknown Encodes a protein containing a... 0.02 Gene family
MA_8161870g0010 No alias 35.2 not assigned.unknown Encodes a protein containing a... 0.07 Gene family
Smo120007 PACid_15411575 35.2 not assigned.unknown CRS1 / YhbY (CRM)... 0.03 Gene family
Smo20706 PACid_15408991 No description available 0.04 Gene family
Smo412905 PACid_15415336 35.2 not assigned.unknown CRS1 / YhbY (CRM)... 0.02 Gene family
Solyc02g086200.2.1 Solyc02g086200.2 27.1.1 RNA.processing.splicing ortholog of maize... 0.02 Gene family
Solyc03g119450.3.1 Solyc03g119450.3 33.99 development.unspecified embryo defective 1865 (EMB1865) 0.04 Gene family
Solyc07g039500.3.1 Solyc07g039500.3 No description available 0.04 Gene family
Solyc09g083350.3.1 Solyc09g083350.3 35.2 not assigned.unknown Encodes a CRM domain protein... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 555 660
IPR001890 RNA-binding_CRM 358 440
No external refs found!