LOC_Os09g09480.2


Description : component VPS32/SNF7 of ESCRT-III complex


Gene families : OG_01_0001223 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001223_tree ,
OG_02_0001557 (LandPlants) Phylogenetic Tree(s): OG_02_0001557_tree ,
OG_03_0001828 (SeedPlants) Phylogenetic Tree(s): OG_03_0001828_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g09480.2
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AT2G19830 SNF7.2, VPS32 SNF7 family protein 0.04 Archaeplastida
Cre06.g282200 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 Archaeplastida
GSVIVT01015258001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
GSVIVT01016913001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.06 Archaeplastida
MA_10435786g0010 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 Archaeplastida
Mp6g10770.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.05 Archaeplastida
Solyc05g026050.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.05 Archaeplastida
Solyc08g065900.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.06 Archaeplastida
Zm00001e024016_P002 No alias component VPS32/SNF7 of ESCRT-III complex 0.04 Archaeplastida
Zm00001e037444_P001 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 Archaeplastida
AMTR_s00056p00189660 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 LandPlants
AT2G19830 SNF7.2, VPS32 SNF7 family protein 0.04 LandPlants
GSVIVT01015258001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 LandPlants
GSVIVT01016913001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 LandPlants
Mp6g10770.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.05 LandPlants
Solyc05g026050.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 LandPlants
Solyc08g065900.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.04 LandPlants
Zm00001e024016_P002 No alias component VPS32/SNF7 of ESCRT-III complex 0.04 LandPlants
Zm00001e037444_P001 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 LandPlants
AMTR_s00056p00189660 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 SeedPlants
AT2G19830 SNF7.2, VPS32 SNF7 family protein 0.03 SeedPlants
GSVIVT01015258001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 SeedPlants
GSVIVT01016913001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 SeedPlants
MA_216716g0010 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc05g026050.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 SeedPlants
Solyc08g065900.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.04 SeedPlants
Zm00001e037444_P001 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005024 Snf7_fam 22 182
No external refs found!