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  5. AMTR_s00079p00143780

AMTR_s00079p00143780


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000002 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0000006 (SeedPlants) Phylogenetic Tree(s): OG_03_0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00143780
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.02 Archaeplastida
AT3G55730 AtMYB109, MYB109 myb domain protein 109 0.07 Archaeplastida
Cre03.g144747 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01027949001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01030434001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_15814 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_23921 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34882 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g38210.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_37851g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_62361g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c15_1270V3.1 No alias myb domain protein 86 0.04 Archaeplastida
Pp3c15_24080V3.1 No alias myb domain protein 33 0.01 Archaeplastida
Pp3c19_20750V3.1 No alias myb domain protein 20 0.03 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Smo77255 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g009070.3.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e006078_P001 No alias Transcription factor GAMYB OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Zm00001e019110_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024682_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e030314_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.01 LandPlants
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.01 LandPlants
AT5G56110 MYB103,... myb domain protein 103 0.01 LandPlants
GSVIVT01027949001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
GSVIVT01030434001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
Gb_05115 No alias transcription factor (MYB) 0.04 LandPlants
Gb_22884 No alias transcription factor (MYB) 0.01 LandPlants
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.01 LandPlants
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.01 LandPlants
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.01 LandPlants
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.01 LandPlants
MA_10426901g0020 No alias transcription factor (MYB) 0.02 LandPlants
MA_12445g0010 No alias transcription factor (MYB) 0.01 LandPlants
MA_140579g0010 No alias transcription factor (MYB) 0.05 LandPlants
MA_298677g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_37851g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_62361g0010 No alias transcription factor (MYB) 0.05 LandPlants
MA_83918g0010 No alias transcription factor (MYB) 0.01 LandPlants
Pp3c15_1270V3.1 No alias myb domain protein 86 0.04 LandPlants
Pp3c15_24080V3.1 No alias myb domain protein 33 0.01 LandPlants
Pp3c17_7730V3.1 No alias myb domain protein 55 0.01 LandPlants
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.01 LandPlants
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.01 LandPlants
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.01 LandPlants
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.01 LandPlants
Solyc12g008670.2.1 No alias transcription factor (MYB) 0.01 LandPlants
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e006078_P001 No alias Transcription factor GAMYB OS=Oryza sativa subsp. indica... 0.02 LandPlants
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.01 SeedPlants
GSVIVT01030434001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 SeedPlants
Gb_22884 No alias transcription factor (MYB) 0.01 SeedPlants
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.01 SeedPlants
MA_10426901g0020 No alias transcription factor (MYB) 0.02 SeedPlants
MA_12445g0010 No alias transcription factor (MYB) 0.01 SeedPlants
MA_140579g0010 No alias transcription factor (MYB) 0.04 SeedPlants
MA_298677g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_37851g0010 No alias transcription factor (MYB) 0.02 SeedPlants
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.01 SeedPlants
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!