LOC_Os08g42560.1


Description : glycine-tRNA ligase


Gene families : OG_01_0003762 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003762_tree ,
OG_02_0004015 (LandPlants) Phylogenetic Tree(s): OG_02_0004015_tree ,
OG_03_0004457 (SeedPlants) Phylogenetic Tree(s): OG_03_0004457_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42560.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT1G29880 No alias glycyl-tRNA synthetase / glycine--tRNA ligase 0.04 Archaeplastida
Cre05.g233800 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.1 Archaeplastida
GSVIVT01001092001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Mp7g10240.1 No alias glycine-tRNA ligase 0.07 Archaeplastida
Pp3c6_4010V3.1 No alias glycyl-tRNA synthetase / glycine--tRNA ligase 0.07 Archaeplastida
Smo268427 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Solyc11g039830.2.1 No alias glycine-tRNA ligase 0.06 Archaeplastida
Zm00001e003709_P001 No alias glycine-tRNA ligase 0.05 Archaeplastida
Zm00001e024231_P001 No alias glycine-tRNA ligase 0.06 Archaeplastida
AT1G29880 No alias glycyl-tRNA synthetase / glycine--tRNA ligase 0.04 LandPlants
GSVIVT01001092001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 LandPlants
Mp7g10240.1 No alias glycine-tRNA ligase 0.07 LandPlants
Pp3c6_4010V3.1 No alias glycyl-tRNA synthetase / glycine--tRNA ligase 0.07 LandPlants
Solyc11g039830.2.1 No alias glycine-tRNA ligase 0.05 LandPlants
Zm00001e003709_P001 No alias glycine-tRNA ligase 0.05 LandPlants
Zm00001e024231_P001 No alias glycine-tRNA ligase 0.06 LandPlants
AT1G29880 No alias glycyl-tRNA synthetase / glycine--tRNA ligase 0.04 SeedPlants
GSVIVT01001092001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 SeedPlants
Solyc11g039830.2.1 No alias glycine-tRNA ligase 0.04 SeedPlants
Zm00001e003709_P001 No alias glycine-tRNA ligase 0.03 SeedPlants
Zm00001e024231_P001 No alias glycine-tRNA ligase 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002314 aa-tRNA-synt_IIb 302 600
IPR000738 WHEP-TRS_dom 63 104
IPR004154 Anticodon-bd 627 714
No external refs found!