Zm00001d019195


Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. SU(VAR)3-9 homolog 3 (SUVH3)


Gene families : OG_01_0000166 (Gene family) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d019195
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT2G35160 SUVH5, SGD9 SU(VAR)3-9 homolog 5 0.02 Gene family
AT5G04940 SUVH1 SU(VAR)3-9 homolog 1 0.02 Gene family
AT5G47160 No alias YDG/SRA domain-containing protein 0.03 Gene family
Cre02.g089200 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Cre07.g352600 No alias No description available 0.01 Gene family
GSVIVT01005913001 No alias No description available 0.1 Gene family
GSVIVT01025844001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
GSVIVT01027376001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
GSVIVT01032986001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
LOC_Os01g59620 Os01g0811300 27.3.69 RNA.regulation of transcription.SET-domain... 0.06 Gene family
LOC_Os05g41172 Os05g0490700 27.3.69 RNA.regulation of transcription.SET-domain... 0.07 Gene family
LOC_Os07g25450 Os07g0435900 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Solyc09g082050.3.1 Solyc09g082050.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Solyc10g077070.2.1 Solyc10g077070.2 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Solyc12g096990.2.1 Solyc12g096990.2 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA InterProScan
BP GO:0034968 histone lysine methylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001214 SET_dom 694 823
IPR007728 Pre-SET_dom 576 675
IPR003105 SRA_YDG 400 548
No external refs found!