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  5. LOC_Os08g42000.1

LOC_Os08g42000.1


Description : Nuclear transport factor 2 OS=Oryza sativa subsp. japonica (sp|q9xj54|ntf2_orysj : 243.0)


Gene families : OG_01_0001970 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001970_tree ,
OG_02_0002450 (LandPlants) Phylogenetic Tree(s): OG_02_0002450_tree ,
OG_03_0002701 (SeedPlants) Phylogenetic Tree(s): OG_03_0002701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42000.1
Cluster HCCA: Cluster_345

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00078860 evm_27.TU.AmTr_v1... Nuclear transport factor 2B OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G27310 NTF2A nuclear transport factor 2A 0.03 Archaeplastida
Cre07.g316000 No alias Nuclear transport factor 2B OS=Arabidopsis thaliana 0.02 Archaeplastida
Mp6g01400.1 No alias Nuclear transport factor 2B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo169222 No alias Nuclear transport factor 2B OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo230884 No alias Nuclear transport factor 2B OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc02g068150.4.1 No alias Nuclear transport factor 2A OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e003672_P001 No alias Nuclear transport factor 2 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e021969_P002 No alias no hits & (original description: none) 0.09 Archaeplastida
AMTR_s00013p00078860 evm_27.TU.AmTr_v1... Nuclear transport factor 2B OS=Arabidopsis thaliana 0.03 LandPlants
AT1G27310 NTF2A nuclear transport factor 2A 0.03 LandPlants
Smo169222 No alias Nuclear transport factor 2B OS=Arabidopsis thaliana 0.03 LandPlants
Smo230884 No alias Nuclear transport factor 2B OS=Arabidopsis thaliana 0.04 LandPlants
Zm00001e003672_P001 No alias Nuclear transport factor 2 OS=Oryza sativa subsp.... 0.03 LandPlants
Zm00001e021969_P002 No alias no hits & (original description: none) 0.09 LandPlants
AMTR_s00013p00078860 evm_27.TU.AmTr_v1... Nuclear transport factor 2B OS=Arabidopsis thaliana 0.03 SeedPlants
AT1G27310 NTF2A nuclear transport factor 2A 0.03 SeedPlants
Zm00001e003672_P001 No alias Nuclear transport factor 2 OS=Oryza sativa subsp.... 0.03 SeedPlants
Zm00001e021969_P002 No alias no hits & (original description: none) 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002075 NTF2 6 119
No external refs found!