Aliases : NFD03, HMGB3, NFD3
Description : DNA bending architectural protein *(HMG-B) & original description: none
Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aev_g03724 | |
Cluster | HCCA: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00044p00160130 | NFD03, HMGB3,... | HMG1/2-like protein OS=Glycine max | 0.02 | OrthoFinder output from all 47 species | |
AT3G51880 | NFD1, HMGB1 | high mobility group B1 | 0.02 | OrthoFinder output from all 47 species | |
Ala_g04836 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020902.35 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Dac_g08672 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01026642001 | NFD2, HMG BETA... | HMG1/2-like protein OS=Glycine max | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g05652 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g18387 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0043.g012915 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g39912 | ATHMG, HMG, SSRP1, NFD | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0016311 | dephosphorylation | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR009071 | HMG_box_dom | 52 | 121 |
No external refs found! |