Zm00001d019041


Description : 27.4 RNA.RNA binding Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. ATRZ-1A


Gene families : OG_01_0000053 (Gene family) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d019041
Cluster HCCA cluster: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.04 Gene family
AT1G60650 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Gene family
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.02 Gene family
AT3G26420 ATRZ-1A RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Gene family
AT5G61030 GR-RBP3 glycine-rich RNA-binding protein 3 0.05 Gene family
GSVIVT01021024001 No alias 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.05 Gene family
LOC_Os07g08960 Os07g0187300 No description available 0.04 Gene family
MA_112005g0010 No alias No description available 0.02 Gene family
Solyc01g104840.3.1 Solyc01g104840.3 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
Solyc03g071560.3.1 Solyc03g071560.3 No description available 0.02 Gene family
Solyc10g047130.2.1 Solyc10g047130.2 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
Solyc10g081180.2.1 Solyc10g081180.2 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.04 Gene family
Solyc11g008210.2.1 Solyc11g008210.2 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 9 78
IPR001878 Znf_CCHC 123 137
No external refs found!