Description : component *(eS1) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001731_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00271660 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g05100 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0825.g088224 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.10G049700.1 | Ceric.10G049700 | component *(eS1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020710.39 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
Cre13.g568650 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01021836001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Gb_02289 | No alias | component RPS3a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g18550.1 | LOC_Os02g18550 | component RPS3a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g10340.1 | LOC_Os03g10340 | component RPS3a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
MA_124901g0010 | No alias | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
MA_31004g0010 | No alias | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Sam_g07668 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g07669 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g072490.3.1 | Solyc06g072490 | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Spa_g05776 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038777_P001 | Zm00001e038777 | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006525 | arginine metabolic process | IEP | HCCA |
BP | GO:0006526 | arginine biosynthetic process | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | HCCA |
MF | GO:0030515 | snoRNA binding | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001593 | Ribosomal_S3Ae | 16 | 221 |
No external refs found! |