Zm00001d018976 (GRMZM2G333997, GRMZM2G334041)


Aliases : GRMZM2G333997, GRMZM2G334041

Description : 27.3.46 RNA.regulation of transcription.DNA methyltransferases Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation. methyltransferase 1 (MET1)


Gene families : OG_01_0002491 (Gene family) Phylogenetic Tree(s): OG0002491_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d018976
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT4G13610 MEE57 DNA (cytosine-5-)-methyltransferase family protein 0.02 Gene family
AT5G49160 DDM2, MET1,... methyltransferase 1 0.2 Gene family
Cpa|evm.model.tig00001366.1 No alias 27.3.46 RNA.regulation of transcription.DNA... 0.02 Gene family
Cre10.g461750 No alias 27.3.46 RNA.regulation of transcription.DNA... 0.07 Gene family
GSVIVT01000263001 No alias 27.3.46 RNA.regulation of transcription.DNA... 0.3 Gene family
LOC_Os07g08500 Os07g0182900 27.3.46 RNA.regulation of transcription.DNA... 0.07 Gene family
MA_88843g0010 No alias 27.3.46 RNA.regulation of transcription.DNA... 0.12 Gene family
Solyc11g030600.3.1 Solyc11g030600.3 27.3.46 RNA.regulation of transcription.DNA... 0.12 Gene family

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001525 C5_MeTfrase 1181 1524
IPR001525 C5_MeTfrase 1098 1146
IPR001025 BAH_dom 749 876
IPR001025 BAH_dom 914 1053
IPR022702 Cytosine_MeTrfase1_RFD 402 554
IPR022702 Cytosine_MeTrfase1_RFD 108 241
No external refs found!