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Description : component *(uS12) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0002074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g03591 | |
| Cluster | HCCA: Cluster_73 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g504200 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04209 | No alias | component *(uS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g61814.1 | LOC_Os01g61814 | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g60400.1 | LOC_Os03g60400 | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_19871g0020 | No alias | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| MA_9043057g0010 | No alias | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g08680.1 | No alias | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c7_14200V3.1 | Pp3c7_14200 | Ribosomal protein S12/S23 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g23987 | No alias | component *(uS12) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g007350.3.1 | Solyc09g007350 | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g086020.3.1 | Solyc10g086020 | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006170_P001 | Zm00001e006170 | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011770_P001 | Zm00001e011770 | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019377_P001 | Zm00001e019377 | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006032 | Ribosomal_S12/S23 | 60 | 170 |
| No external refs found! |