Zm00001d018779 (GRMZM2G047954)


Aliases : GRMZM2G047954

Description : 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. photosystem II subunit P-1 (PSBP-1)


Gene families : OG_01_0005752 (Gene family) Phylogenetic Tree(s): OG0005752_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d018779
Cluster HCCA cluster: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT1G06680 OE23, OEE2,... photosystem II subunit P-1 0.31 Gene family
Cre12.g550850 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.26 Gene family
GSVIVT01020818001 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.24 Gene family
LOC_Os07g04840 Os07g0141400 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.31 Gene family
MA_3005g0010 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.06 Gene family
Smo134339 PACid_15410500 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.07 Gene family
Solyc07g044860.3.1 Solyc07g044860.3 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.24 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
CC GO:0009523 photosystem II IEA InterProScan
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan
BP GO:0015979 photosynthesis IEA InterProScan
CC GO:0019898 extrinsic component of membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002683 PsbP_C 133 302
No external refs found!