LOC_Os08g37920.1

Description : Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana (sp|q9lme6|mbd8_arath : 111.0)

Gene families : OG_01_0004509 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004509_tree ,
OG_02_0003280 (LandPlants) Phylogenetic Tree(s): OG_02_0003280_tree ,
OG_03_0002357 (SeedPlants) Phylogenetic Tree(s): OG_03_0002357_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g37920.1
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01009040001	No alias	Methyl-CpG-binding domain-containing protein 8...	0.04	Archaeplastida
Solyc01g105330.3.1	No alias	Methyl-CpG-binding domain-containing protein 8...	0.03	Archaeplastida
Zm00001e003405_P001	No alias	Methyl-CpG-binding domain-containing protein 8...	0.07	Archaeplastida
Zm00001e010007_P001	No alias	Methyl-CpG-binding domain-containing protein 8...	0.05	Archaeplastida
Zm00001e024319_P003	No alias	Methyl-CpG-binding domain-containing protein 8...	0.06	Archaeplastida
GSVIVT01009040001	No alias	Methyl-CpG-binding domain-containing protein 8...	0.03	LandPlants
Solyc01g105330.3.1	No alias	Methyl-CpG-binding domain-containing protein 8...	0.03	LandPlants
Zm00001e003405_P001	No alias	Methyl-CpG-binding domain-containing protein 8...	0.06	LandPlants
Zm00001e010007_P001	No alias	Methyl-CpG-binding domain-containing protein 8...	0.02	LandPlants
Zm00001e024319_P003	No alias	Methyl-CpG-binding domain-containing protein 8...	0.04	LandPlants
GSVIVT01009040001	No alias	Methyl-CpG-binding domain-containing protein 8...	0.02	SeedPlants
Solyc01g105330.3.1	No alias	Methyl-CpG-binding domain-containing protein 8...	0.02	SeedPlants
Zm00001e003405_P001	No alias	Methyl-CpG-binding domain-containing protein 8...	0.05	SeedPlants
Zm00001e024319_P003	No alias	Methyl-CpG-binding domain-containing protein 8...	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	202	245

External Links

No external refs found!