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  5. Aev_g03313

Aev_g03313


Description : not classified & original description: none


Gene families : OG0006792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006792_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g03313
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00233660 evm_27.TU.AmTr_v1... GTP-binding protein At3g49725, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT5G57960 No alias GTP-binding protein, HflX 0.03 OrthoFinder output from all 47 species
Adi_g059600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G037600.1 Ceric.34G037600 not classified & original description: pacid=50623913... 0.06 OrthoFinder output from all 47 species
Dcu_g19282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27515 No alias component MED19 of head module of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
LOC_Os11g38020.1 LOC_Os11g38020 GTP-binding protein At3g49725, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_10437248g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g01100.1 No alias GTP-binding protein At3g49725, chloroplastic... 0.05 OrthoFinder output from all 47 species
Msp_g06486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g64021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g18146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo77541 No alias GTP-binding protein At3g49725, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g07834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR025121 GTPase_HflX_N 271 359
IPR045498 HflX_C 576 648
IPR006073 GTP-bd 447 565
IPR032305 GTP-bd_M 362 439
No external refs found!