Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00267830 | evm_27.TU.AmTr_v1... | Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00025p00229930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00044p00112360 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00077p00070720 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AT1G24580 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT1G72310 | ATL3 | RING/U-box superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT2G17450 | RHA3A | RING-H2 finger A3A | 0.02 | OrthoFinder output from all 47 species | |
AT2G34000 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G37580 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G18930 | No alias | RING/U-box superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
AT3G61550 | No alias | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
AT3G62690 | ATL5 | AtL5 | 0.03 | OrthoFinder output from all 47 species | |
AT5G01880 | No alias | RING/U-box superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT5G17600 | No alias | RING/U-box superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT5G41400 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g082325 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g03039 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g17816 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g32159 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene22373.t1 | Aspi01Gene22373 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0109.g045400 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
Cba_g32773 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g34751 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G039000.1 | Ceric.25G039000 | not classified & original description: pacid=50594534... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g02003 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g44212 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g40178 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012015001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01012022001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01024698001 | ATL2, TL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01030125001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
Gb_08091 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g16120.1 | RHA2A, LOC_Os01g16120 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os01g20930.1 | ATL3, LOC_Os01g20930 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g52210.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g05560.1 | LOC_Os03g05560 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os06g45580.1 | RHA3A, LOC_Os06g45580 | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g38460.1 | XERICO, LOC_Os08g38460 | ubiquitin protein ligase (XERICO) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g30160.1 | XERICO, LOC_Os09g30160 | ubiquitin protein ligase (XERICO) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g01750.1 | LOC_Os12g01750 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Len_g00032 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g00995 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Len_g23799 | BRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10021g0010 | No alias | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
MA_10145129g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
MA_125507g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_15246g0010 | BRH1 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
MA_373963g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
MA_391590g0010 | BRH1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_43543g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
MA_4795437g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
MA_51630g0010 | No alias | RING-H2-class E3 ligase | 0.07 | OrthoFinder output from all 47 species | |
MA_754688g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_92848g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Mp1g27170.1 | No alias | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
Mp3g00390.1 | No alias | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
Msp_g10125 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g10847 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Msp_g31863 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g03518 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g14314 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g22098 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g25585 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g10421 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g29694 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g41633 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g11949 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g20219 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g18088 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g42004 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0116.g021081 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g07697 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Smo109459 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
Smo121181 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g081040.4.1 | Solyc01g081040 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g074820.3.1 | Solyc04g074820 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g006400.3.1 | Solyc07g006400 | IDF1 iron uptake IRT1-ubiquitin ligase | 0.08 | OrthoFinder output from all 47 species | |
Solyc08g008080.1.1 | BRH1, Solyc08g008080 | E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g094385.1.1 | Solyc12g094385 | E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g29239 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000398_P001 | Zm00001e000398 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e001923_P001 | ATL3, Zm00001e001923 | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e002233_P001 | Zm00001e002233 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e003426_P001 | XERICO, Zm00001e003426 | ubiquitin protein ligase (XERICO) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007129_P001 | Zm00001e007129 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e014286_P001 | Zm00001e014286 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e015259_P001 | Zm00001e015259 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015905_P001 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e016474_P001 | Zm00001e016474 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e017960_P001 | RHA3A, Zm00001e017960 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018028_P001 | Zm00001e018028 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029032_P001 | Zm00001e029032 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e031874_P001 | Zm00001e031874 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e035560_P001 | ATL3, Zm00001e035560 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e041385_P001 | Zm00001e041385 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 85 | 128 |
No external refs found! |