LOC_Os08g33120.1


Description : mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP trafficking complex


Gene families : OG_01_0001027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001027_tree ,
OG_02_0000803 (LandPlants) Phylogenetic Tree(s): OG_02_0000803_tree ,
OG_03_0000994 (SeedPlants) Phylogenetic Tree(s): OG_03_0000994_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g33120.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT5G59950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Cpa|evm.model.tig00000194.40 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
GSVIVT01025009001 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
Gb_04102 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
MA_102122g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g07590.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
Pp3c6_2570V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Solyc04g014460.4.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
Zm00001e022419_P005 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
Zm00001e030972_P001 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 Archaeplastida
AT5G59950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
GSVIVT01025009001 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 LandPlants
Gb_04102 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
MA_102122g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_4147g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
Mp2g07590.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
Pp3c6_2570V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
Solyc04g014460.4.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
Solyc10g086400.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
Zm00001e022419_P005 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants
Zm00001e030972_P001 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 LandPlants
AT5G37720 ALY4 ALWAYS EARLY 4 0.02 SeedPlants
AT5G59950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 SeedPlants
GSVIVT01025009001 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 SeedPlants
Gb_04102 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 SeedPlants
MA_102122g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_4147g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 SeedPlants
Solyc04g014460.4.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 SeedPlants
Solyc10g086400.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 SeedPlants
Solyc11g073280.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 SeedPlants
Zm00001e022419_P005 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 SeedPlants
Zm00001e030972_P001 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 92 160
No external refs found!