Zm00001d018274 (GRMZM2G478664)


Aliases : GRMZM2G478664

Description : 29.1.5 protein.aa activation.isoleucine-tRNA ligase ovule abortion 2 (OVA2)


Gene families : OG_01_0005624 (Gene family) Phylogenetic Tree(s): OG0005624_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d018274
Cluster HCCA cluster: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT5G49030 OVA2 tRNA synthetase class I (I, L, M and V) family protein 0.17 Gene family
Cpa|evm.model.tig00000630.10 No alias 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.02 Gene family
Cre16.g689871 No alias 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.11 Gene family
GSVIVT01017762001 No alias 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.15 Gene family
LOC_Os02g53770 Os02g0778200 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.05 Gene family
Smo437676 PACid_15419827 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.05 Gene family
Smo445517 PACid_15420275 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.05 Gene family
Solyc01g080810.3.1 Solyc01g080810.3 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 782 946
IPR010663 Znf_FPG/IleRS 1016 1043
IPR002300 aa-tRNA-synth_Ia 94 736
No external refs found!