Aliases : LSH4
Description : plant-specific ALOG-type transcription factor & original description: none
Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00153p00047660 | evm_27.TU.AmTr_v1... | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... | 0.02 | OrthoFinder output from all 47 species | |
AT2G31160 | LSH3 | Protein of unknown function (DUF640) | 0.03 | OrthoFinder output from all 47 species | |
AT4G18610 | LSH9 | Protein of unknown function (DUF640) | 0.03 | OrthoFinder output from all 47 species | |
Als_g04816 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g17249 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g21143 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene66763.t1 | LSH4, Aspi01Gene66763 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g31587 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G086500.1 | LSH4, Ceric.02G086500 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.14G090800.1 | LSH6, Ceric.14G090800 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.18G075200.1 | LSH4, Ceric.18G075200 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.22G071900.1 | LSH6, Ceric.22G071900 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01028348001 | LSH3 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.02 | OrthoFinder output from all 47 species | |
Gb_36840 | LSH4 | Protein G1-like6 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g41460.1 | LSH4, LOC_Os02g41460 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g43580.2 | LSH4, LOC_Os04g43580 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.02 | OrthoFinder output from all 47 species | |
Len_g03152 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Len_g17976 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
MA_211369g0010 | LSH3 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g25188 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g02008 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g20213 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0149.g023275 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g069510.1.1 | LSH4, Solyc02g069510 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... | 0.01 | OrthoFinder output from all 47 species | |
Spa_g04648 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g07735 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g22416 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g22798 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g28138 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g47479 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g06794 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004570_P001 | LSH4, Zm00001e004570 | Protein G1-like4 OS=Oryza sativa subsp. indica... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e012687_P001 | LSH4, Zm00001e012687 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013711_P001 | LSH4, Zm00001e013711 | Protein G1-like2 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019403_P001 | LSH6, Zm00001e019403 | Protein G1-like7 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023022_P001 | LSH4, Zm00001e023022 | Protein G1-like3 OS=Oryza sativa subsp. indica... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e027283_P001 | LSH6, Zm00001e027283 | Protein G1-like8 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032784_P001 | LSH6, Zm00001e032784 | Protein G1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008289 | lipid binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006936 | ALOG_dom | 179 | 297 |
No external refs found! |