Zm00001d018031 (GRMZM2G105844)


Aliases : GRMZM2G105844

Description : 10.7 cell wall.modification Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A1 (EXPA1)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d018031
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.07 Gene family
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 Gene family
AT4G38210 ATEXPA20,... expansin A20 0.03 Gene family
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 Gene family
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 Gene family
AT5G39260 EXPA21, EXP21,... expansin A21 0.02 Gene family
AT5G39290 ATEXP26, ATHEXP... expansin A26 0.03 Gene family
AT5G39300 ATEXPA25,... expansin A25 0.04 Gene family
GSVIVT01007987001 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
GSVIVT01008762001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
GSVIVT01014362001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
GSVIVT01016525001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.04 Gene family
GSVIVT01023857001 No alias 10.7 cell wall.modification expansin -like protein.... 0.05 Gene family
GSVIVT01024946001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.04 Gene family
GSVIVT01030191001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
GSVIVT01033691001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.03 Gene family
GSVIVT01035233001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os01g14650 Os01g0248900 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g21820 Os03g0336400 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g25990 Os03g0377100 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os05g39990 Os05g0477600 10.7 cell wall.modification Member of Alpha-Expansin... 0.05 Gene family
LOC_Os06g41700 Os06g0621900 10.7 cell wall.modification expansin -like protein.... 0.02 Gene family
LOC_Os08g44790 Os08g0561900 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
MA_10299189g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.06 Gene family
MA_3618g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
MA_36587g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_474624g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
MA_4979g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_651027g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo143857 PACid_15418621 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo230202 PACid_15412224 10.7 cell wall.modification putative expansin. Naming... 0.03 Gene family
Smo409954 PACid_15406290 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo410512 PACid_15406346 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo90935 PACid_15416360 10.7 cell wall.modification Encodes an expansin. Naming... 0.01 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc03g115890.3.1 Solyc03g115890.3 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc06g051800.3.1 Solyc06g051800.3 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Solyc08g080060.3.1 Solyc08g080060.3 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Solyc09g018020.3.1 Solyc09g018020.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.06 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d016054 GRMZM2G359799 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032883 GRMZM2G332412 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035104 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d043047 GRMZM2G339122 10.7 cell wall.modification Member of Alpha-Expansin... 0.06 Gene family
Zm00001d047353 GRMZM2G127029 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 98 186
IPR007117 Expansin_CBD 197 275
No external refs found!