LOC_Os08g30480.1


Description : small subunit sigma of AP-4 vacuole cargo adaptor complex


Gene families : OG_01_0000560 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000560_tree ,
OG_02_0007286 (LandPlants) Phylogenetic Tree(s): OG_02_0007286_tree ,
OG_03_0008306 (SeedPlants) Phylogenetic Tree(s): OG_03_0008306_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g30480.1
Cluster HCCA: Cluster_363

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00186170 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
AMTR_s00147p00042930 evm_27.TU.AmTr_v1... AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G19790 No alias SNARE-like superfamily protein 0.02 Archaeplastida
AT3G50860 No alias Clathrin adaptor complex small chain family protein 0.03 Archaeplastida
AT4G35410 No alias Clathrin adaptor complex small chain family protein 0.04 Archaeplastida
Cre07.g324600 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 Archaeplastida
Cre07.g330950 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.01 Archaeplastida
Cre09.g394100 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 Archaeplastida
GSVIVT01015270001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 Archaeplastida
Gb_30890 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
MA_130401g0010 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 Archaeplastida
MA_23830g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9040447g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g14560.1 No alias AP-3 complex subunit sigma OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp1g19570.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 Archaeplastida
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.05 Archaeplastida
Mp6g09610.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 Archaeplastida
Pp3c12_2376V3.1 No alias Clathrin adaptor complex small chain family protein 0.02 Archaeplastida
Pp3c14_14670V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Pp3c15_9140V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Pp3c26_15020V3.1 No alias associated protein 19 0.04 Archaeplastida
Pp3c4_27730V3.1 No alias associated protein 19 0.05 Archaeplastida
Pp3c9_6760V3.1 No alias SNARE-like superfamily protein 0.03 Archaeplastida
Zm00001e011050_P001 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 Archaeplastida
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida
GSVIVT01015270001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 LandPlants
MA_23830g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.03 LandPlants
Mp6g09610.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 LandPlants
Pp3c14_14670V3.1 No alias SNARE-like superfamily protein 0.02 LandPlants
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 LandPlants
AMTR_s00056p00186500 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 SeedPlants
GSVIVT01015270001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 SeedPlants
MA_23830g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.03 SeedPlants
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 3 141
No external refs found!