Dac_g42852


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g42852

Target Alias Description ECC score Gene Family Method Actions
AT1G25360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g11195 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14400.t1 CRR2, Aspi01Gene14400 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30842.t1 OTP84, Aspi01Gene30842 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67679 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05618 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g09563 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g33294 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18591 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17108 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g19554 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20115 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g22808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g13338 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19567 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22825 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57955 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016088 No alias not classified & original description: CDS=1-1020 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019124 No alias not classified & original description: CDS=1-405 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025549 No alias not classified & original description: CDS=1-3228 0.03 OrthoFinder output from all 47 species
Tin_g15629 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 98 119
IPR002885 Pentatricopeptide_repeat 200 223
IPR002885 Pentatricopeptide_repeat 226 272
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 328 375
IPR002885 Pentatricopeptide_repeat 23 68
No external refs found!