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  5. Aev_g02708

Aev_g02708


Description : component *(bL28c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0006464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g02708
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00174670 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT2G33450 No alias Ribosomal L28 family 0.03 OrthoFinder output from all 47 species
Adi_g107767 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g54254 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aob_g09499 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre06.g265800 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g00398 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ehy_g00252 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01027870001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
MA_10426581g0010 No alias component psRPL28 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Mp4g05120.1 No alias component psRPL28 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Ore_g11041 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pir_g58585 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c6_1140V3.1 Pp3c6_1140 Ribosomal L28 family 0.01 OrthoFinder output from all 47 species
Sam_g23667 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc09g090410.3.1 Solyc09g090410 component psRPL28 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Tin_g00322 No alias component *(bL28c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR026569 Ribo_L28/L24 73 131
No external refs found!