AMTR_s00078p00154520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.135

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase


Gene families : OG_01_0000123 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000123_tree ,
OG_02_0000139 (LandPlants) Phylogenetic Tree(s): OG_02_0000139_tree ,
OG_03_0009931 (SeedPlants) Phylogenetic Tree(s): OG_03_0009931_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00154520
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00045070 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
AMTR_s00129p00102500 evm_27.TU.AmTr_v1... 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G07720 KCS3 3-ketoacyl-CoA synthase 3 0.03 Archaeplastida
GSVIVT01005975001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.06 Archaeplastida
GSVIVT01018539001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
GSVIVT01022919001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
GSVIVT01026270001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
Gb_23820 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Gb_32625 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
LOC_Os02g56860.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
LOC_Os03g08360.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.07 Archaeplastida
LOC_Os03g26530.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
LOC_Os06g14810.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
LOC_Os06g39750.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
LOC_Os10g28060.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
MA_10433600g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
MA_309409g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
MA_339700g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
MA_415118g0020 No alias 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_759169g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Mp1g06080.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Pp3c1_26250V3.1 No alias 3-ketoacyl-CoA synthase 11 0.04 Archaeplastida
Pp3c2_16180V3.1 No alias 3-ketoacyl-CoA synthase 11 0.03 Archaeplastida
Pp3c3_31430V3.1 No alias 3-ketoacyl-CoA synthase 4 0.04 Archaeplastida
Pp3c8_1690V3.1 No alias 3-ketoacyl-CoA synthase 11 0.05 Archaeplastida
Smo437285 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
Smo75021 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
Smo79947 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
Solyc05g009280.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g053870.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Zm00001e002667_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e004603_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Zm00001e004773_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Zm00001e012803_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.08 Archaeplastida
Zm00001e033922_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e034732_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Zm00001e037353_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Gb_23820 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
Gb_32625 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
LOC_Os03g08360.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 LandPlants
LOC_Os06g39750.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
Mp1g06080.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
Pp3c1_26250V3.1 No alias 3-ketoacyl-CoA synthase 11 0.02 LandPlants
Pp3c2_4800V3.1 No alias 3-ketoacyl-CoA synthase 4 0.02 LandPlants
Pp3c3_31430V3.1 No alias 3-ketoacyl-CoA synthase 4 0.02 LandPlants
Pp3c8_1690V3.1 No alias 3-ketoacyl-CoA synthase 11 0.03 LandPlants
Smo75021 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 LandPlants
Smo79947 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 LandPlants
Zm00001e033922_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 LandPlants
Zm00001e037353_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 LandPlants
Solyc12g056720.2.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 SeedPlants
Zm00001e033922_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 48 331
IPR013747 ACP_syn_III_C 348 421
No external refs found!