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  5. Dac_g40218

Dac_g40218


Description : not classified & original description: none


Gene families : OG0002966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g40218

Target Alias Description ECC score Gene Family Method Actions
Ala_g05069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G037800.1 Ceric.03G037800 not classified & original description: pacid=50571745... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.91 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.52 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g05849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439148 No alias No description available 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR031645 VPS13_DH-like 2635 2807
IPR031646 VPS13_extend_chorein 146 378
IPR009543 VPS13_VAB 2057 2323
IPR031642 VPS13_mid_RBG 637 886
IPR026854 VPS13-like_N 9 123
No external refs found!