Zm00001d017678 (GRMZM2G004480)


Aliases : GRMZM2G004480

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d017678
Cluster HCCA cluster: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AT1G04360 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G22500 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G35330 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G35910 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.05 Gene family
AT3G03550 No alias RING/U-box superfamily protein 0.05 Gene family
AT3G18773 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G15975 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.05 Gene family
AT5G06490 No alias RING/U-box superfamily protein 0.04 Gene family
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Gene family
AT5G42200 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.05 Gene family
GSVIVT01008754001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01009096001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01009098001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01015682001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01018343001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01026703001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01027769001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01028306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.03 Gene family
LOC_Os02g43120 Os02g0645000 No description available 0.03 Gene family
LOC_Os03g05570 Os03g0149800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os03g44636 Os03g0648600 No description available 0.03 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os04g49700 Os04g0586700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os05g29676 Os05g0359833 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g08820 Os06g0187300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g16060 Os06g0271600 No description available 0.02 Gene family
LOC_Os06g34560 Os06g0536466,... No description available 0.03 Gene family
LOC_Os06g34870 Os06g0539900,... No description available 0.03 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.02 Gene family
LOC_Os08g44950 Os08g0563500 No description available 0.02 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_1115518g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_1143g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_126287g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_144298g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_184439g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_222729g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_2679g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_41514g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_77628g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_80729g0030 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_96368g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_9764263g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc00g217960.1.1 Solyc00g217960.1 No description available 0.02 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc03g005490.3.1 Solyc03g005490.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc06g053640.1.1 Solyc06g053640.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc06g064440.3.1 Solyc06g064440.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g081780.2.1 Solyc10g081780.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc11g005320.1.1 Solyc11g005320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d016140 GRMZM2G358711 No description available 0.05 Gene family
Zm00001d016142 GRMZM2G324111 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d027685 GRMZM2G056804 No description available 0.05 Gene family
Zm00001d027983 GRMZM2G148706 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.02 Gene family
Zm00001d031880 No alias No description available 0.03 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.03 Gene family
Zm00001d040638 No alias No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 170 213
No external refs found!