Zm00001d017671 (GRMZM2G168980)


Aliases : GRMZM2G168980

Description : 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23 (PUB23)


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d017671
Cluster HCCA cluster: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g33680 Os02g0540700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_779502g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_84154g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
MA_8837995g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
Solyc04g071030.1.1 Solyc04g071030.1 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.02 Gene family
Zm00001d016719 GRMZM2G303964 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 6 74
No external refs found!