Aliases : ARF6
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g075709 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g110090 | ARF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g27918 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene29721.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene45721.t1 | ARF6, Aspi01Gene45721 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene46203.t2 | ARF1, Aspi01Gene46203 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene46204.t1 | ARF1, Aspi01Gene46204 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G061000.1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.29G070000.1 | ARF6, Ceric.29G070000 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g05781 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01004942001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023149001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g06910.1 | ARF6, LOC_Os02g06910 | transcription factor (ARF) | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os02g35140.1 | ARF1, LOC_Os02g35140 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
MA_85955g0010 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000212 | ARF4 | not classified & original description: CDS=1-1212 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0042.g012712 | ARF6 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g16843 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g103050.3.1 | ARF1, Solyc01g103050 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g49441 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e003229_P002 | ARF6, Zm00001e003229 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006577_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e014833_P002 | ARF1, Zm00001e014833 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018761_P001 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e020205_P004 | ARF3, ETT, Zm00001e020205 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005096 | GTPase activator activity | IEP | HCCA |
CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
BP | GO:0006465 | signal peptide processing | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007051 | spindle organization | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0051225 | spindle assembly | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
CC | GO:0070652 | HAUS complex | IEP | HCCA |
BP | GO:0070925 | organelle assembly | IEP | HCCA |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
No external refs found! |