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  5. Dac_g39815

Dac_g39815


Description : not classified & original description: none


Gene families : OG0001121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g39815

Target Alias Description ECC score Gene Family Method Actions
AT5G37140 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.26 MAA3 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g20539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010251001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01010254001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01028736001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01028739001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01028740001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os04g49320.1 LOC_Os04g49320 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Sam_g50257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18276 No alias not classified & original description: none 0.27 OrthoFinder output from all 47 species
Tin_g09909 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e034966_P001 Zm00001e034966 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e041374_P001 Zm00001e041374 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!