Description : not classified & original description: none
Gene families : OG0001121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G37140 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000219.26 | MAA3 | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g20539 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010251001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01010254001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01028736001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01028739001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01028740001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os04g49320.1 | LOC_Os04g49320 | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g50257 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g18276 | No alias | not classified & original description: none | 0.27 | OrthoFinder output from all 47 species | |
Tin_g09909 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Zm00001e034966_P001 | Zm00001e034966 | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e041374_P001 | Zm00001e041374 | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | HCCA |
BP | GO:0001510 | RNA methylation | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
BP | GO:0031167 | rRNA methylation | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | HCCA |
BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |