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  5. Aev_g02563

Aev_g02563 (NUP96, PRE, SAR3, MOS3)


Aliases : NUP96, PRE, SAR3, MOS3

Description : nucleoporin of nuclear pore complex *(NUP98) & original description: none


Gene families : OG0001205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g02563
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00231390 NUP96, PRE,... Nuclear pore complex protein NUP96 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g014270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02615 NUP96, PRE, SAR3, MOS3 nucleoporin of nuclear pore complex *(NUP98) & original... 0.03 OrthoFinder output from all 47 species
Aob_g02339 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034635 NUP96, PRE, SAR3, MOS3 scaffold nucleoporin of nuclear pore complex & original... 0.05 OrthoFinder output from all 47 species
Cba_g09959 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08969 NUP96, PRE, SAR3, MOS3 nucleoporin of nuclear pore complex *(NUP98) & original... 0.02 OrthoFinder output from all 47 species
Dde_g00954 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g15785 NUP96, PRE, SAR3, MOS3 scaffold nucleoporin of nuclear pore complex & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13028 NUP96, PRE, SAR3, MOS3 nucleoporin of nuclear pore complex *(NUP98) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g03244 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.05 OrthoFinder output from all 47 species
Spa_g06165 No alias nucleoporin of nuclear pore complex *(NUP98) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e038897_P001 NUP96, PRE,... NUP96 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021967 Nup98_C 659 940
IPR007230 Nup98_auto-Pept-S59_dom 62 208
No external refs found!