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  5. LOC_Os08g23790.1

LOC_Os08g23790.1


Description : Exopolygalacturonase (Fragment) OS=Platanus acerifolia (sp|q6h9k0|pglr2_plaac : 291.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 264.0)


Gene families : OG_01_0000535 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000535_tree ,
OG_02_0000281 (LandPlants) Phylogenetic Tree(s): OG_02_0000281_tree ,
OG_03_0000124 (SeedPlants) Phylogenetic Tree(s): OG_03_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g23790.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00019p00058670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AT3G07830 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01030018001 No alias Polygalacturonase OS=Nicotiana tabacum 0.03 Archaeplastida
LOC_Os01g33300.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.04 Archaeplastida
Solyc01g066070.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.03 Archaeplastida
Solyc02g069480.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 Archaeplastida
Solyc07g044870.4.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.11 Archaeplastida
Zm00001e017747_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 Archaeplastida
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.08 Archaeplastida
Zm00001e026354_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.04 Archaeplastida
Zm00001e030524_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.06 Archaeplastida
Zm00001e030525_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.05 Archaeplastida
Zm00001e030526_P001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 Archaeplastida
Zm00001e030528_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.06 Archaeplastida
Zm00001e030529_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.03 Archaeplastida
Zm00001e030530_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.03 Archaeplastida
Zm00001e030532_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 345.0) 0.05 Archaeplastida
Zm00001e030533_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 Archaeplastida
Zm00001e030534_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 Archaeplastida
Zm00001e030535_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 Archaeplastida
Zm00001e030537_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 Archaeplastida
Zm00001e030542_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.12 Archaeplastida
Zm00001e042494_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.05 Archaeplastida
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 LandPlants
AMTR_s00019p00058670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 LandPlants
AT3G07830 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
GSVIVT01030018001 No alias Polygalacturonase OS=Nicotiana tabacum 0.03 LandPlants
LOC_Os01g33300.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 LandPlants
Solyc01g066070.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.03 LandPlants
Solyc07g044870.4.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.02 LandPlants
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.11 LandPlants
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.08 LandPlants
Zm00001e030532_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 345.0) 0.05 LandPlants
Zm00001e030542_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.12 LandPlants
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 SeedPlants
Solyc01g066070.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 SeedPlants
Solyc02g069480.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 SeedPlants
Solyc07g044870.4.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.02 SeedPlants
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.1 SeedPlants
Zm00001e014069_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.02 SeedPlants
Zm00001e014072_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.02 SeedPlants
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.08 SeedPlants
Zm00001e030532_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 345.0) 0.05 SeedPlants
Zm00001e030542_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.12 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 66 396
No external refs found!