Aliases : PGP11
Description : not classified & original description: none
Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dac_g38855 | |
Cluster | HCCA: Cluster_42 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g21203 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene32170.t1 | ABCB14,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene42794.t3 | PGP3, MDR3,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
MA_10429045g0010 | No alias | ABC transporter B family member 15 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
MA_114017g0010 | No alias | subfamily ABCB transporter | 0.07 | OrthoFinder output from all 47 species | |
MA_82945g0010 | No alias | Putative multidrug resistance protein OS=Oryza sativa... | 0.06 | OrthoFinder output from all 47 species | |
Msp_g44193 | PGP2 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g33236 | ABCB19,... | ABC-B-type transporter *(AMN3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c1_7210V3.1 | ABCB19,... | ATP binding cassette subfamily B19 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0809.g027741 | PGP20 | subfamily ABCB transporter & original description: CDS=203-3700 | 0.02 | OrthoFinder output from all 47 species | |
Tin_g05722 | ABCB19,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
MF | GO:0140359 | ABC-type transporter activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011527 | ABC1_TM_dom | 78 | 197 |
No external refs found! |