Zm00001d017409 (GRMZM2G140669)


Aliases : GRMZM2G140669

Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. GATA transcription factor 5 (GATA5)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d017409
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT2G18380 GATA20 GATA transcription factor 20 0.06 Gene family
AT2G45050 GATA2 GATA transcription factor 2 0.02 Gene family
AT3G06740 GATA15 GATA transcription factor 15 0.03 Gene family
AT3G20750 GATA29 GATA transcription factor 29 0.03 Gene family
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.03 Gene family
AT4G32890 GATA9 GATA transcription factor 9 0.03 Gene family
Cpa|evm.model.tig00001094.21 No alias No description available 0.01 Gene family
GSVIVT01017011001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
GSVIVT01018180001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
GSVIVT01018951001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
GSVIVT01033385001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
GSVIVT01035614001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os01g47360 Os01g0662800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.13 Gene family
LOC_Os02g43150 Os02g0645600 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
LOC_Os05g44400 Os05g0520300 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os05g49280 Os05g0567900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
LOC_Os05g50270 Os05g0578900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.06 Gene family
MA_92522g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc01g090760.3.1 Solyc01g090760.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
Solyc02g085190.2.1 Solyc02g085190.2 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
Solyc03g033660.3.1 Solyc03g033660.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
Solyc04g015360.3.1 Solyc04g015360.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Solyc05g056120.3.1 Solyc05g056120.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc09g091250.3.1 Solyc09g091250.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d002811 GRMZM2G404973 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d009668 GRMZM2G397616 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.08 Gene family
Zm00001d038801 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
Zm00001d041883 GRMZM2G067171 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d047081 GRMZM2G101058 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d048391 GRMZM2G532534 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d051981 GRMZM2G379005 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 305 339
No external refs found!