AMTR_s00078p00132750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.111

Description : Protein modification.phosphorylation.atypical kinase families.TAF kinase


Gene families : OG_01_0002996 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002996_tree ,
OG_02_0003348 (LandPlants) Phylogenetic Tree(s): OG_02_0003348_tree ,
OG_03_0005183 (SeedPlants) Phylogenetic Tree(s): OG_03_0005183_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00132750
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.07 Archaeplastida
Cpa|evm.model.tig00020903.20 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Cre10.g425501 No alias Transcription initiation factor TFIID subunit 1 OS=Oryza... 0.02 Archaeplastida
GSVIVT01020528001 No alias Protein modification.phosphorylation.atypical kinase... 0.04 Archaeplastida
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.04 Archaeplastida
Mp5g22790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.04 Archaeplastida
Pp3c10_350V3.1 No alias HAC13 protein (HAC13) 0.04 Archaeplastida
Pp3c14_1870V3.1 No alias HAC13 protein (HAC13) 0.03 Archaeplastida
Smo409957 No alias Protein modification.phosphorylation.atypical kinase... 0.06 Archaeplastida
Solyc07g006820.4.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.07 Archaeplastida
Zm00001e037464_P001 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.05 Archaeplastida
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.07 LandPlants
GSVIVT01020528001 No alias Protein modification.phosphorylation.atypical kinase... 0.04 LandPlants
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.02 LandPlants
Mp5g22790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.02 LandPlants
Pp3c10_350V3.1 No alias HAC13 protein (HAC13) 0.04 LandPlants
Smo409957 No alias Protein modification.phosphorylation.atypical kinase... 0.04 LandPlants
Solyc07g006820.4.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.08 LandPlants
Zm00001e037464_P001 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.05 LandPlants
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.06 SeedPlants
GSVIVT01020528001 No alias Protein modification.phosphorylation.atypical kinase... 0.04 SeedPlants
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.02 SeedPlants
Solyc07g006820.4.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.07 SeedPlants
Zm00001e037464_P001 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009067 TAF_II_230-bd 49 101
IPR022591 TFIID_sub1_DUF3591 963 1359
IPR022591 TFIID_sub1_DUF3591 791 861
IPR001487 Bromodomain 1993 2066
IPR000626 Ubiquitin-like_dom 879 945
No external refs found!