Zm00001d017303 (GRMZM2G042173)


Aliases : GRMZM2G042173

Description : 29.2.99 protein.synthesis.misc bindingRNA binding


Gene families : OG_01_0002987 (Gene family) Phylogenetic Tree(s): OG0002987_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d017303
Cluster HCCA cluster: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT2G39260 No alias binding;RNA binding 0.03 Gene family
Cpa|evm.model.tig00022080.18 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.03 Gene family
Cre17.g729250 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.02 Gene family
GSVIVT01016353001 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.05 Gene family
LOC_Os02g42040 Os02g0631500,... 29.2.99 protein.synthesis.misc bindingRNA binding 0.04 Gene family
Solyc04g049770.3.1 Solyc04g049770.3 29.2.99 protein.synthesis.misc bindingRNA binding 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 137 330
IPR003890 MIF4G-like_typ-3 18 119
IPR007193 Upf2/Nmd2_C 451 588
No external refs found!