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  5. Aev_g02298

Aev_g02298


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g02298

Target Alias Description ECC score Gene Family Method Actions
AT1G14200 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G26800 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G56340 ATCRT1 RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g066616 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g14287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G016600.1 Ceric.35G016600 not classified & original description: pacid=50582007... 0.02 OrthoFinder output from all 47 species
Dde_g03388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008897001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01009934001 CIP8 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g58780.1 RHC1A, LOC_Os01g58780 Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species
LOC_Os06g01200.1 LOC_Os06g01200 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
MA_433917g0010 RHC1A Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species
MA_76949g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_816375g0010 RHC1A Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species
Nbi_g02165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c3_13100V3.1 Pp3c3_13100 RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020256 No alias not classified & original description: CDS=1-1698 0.02 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10775 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g55156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010857_P001 Zm00001e010857 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038199_P001 RHC1A, Zm00001e038199 Probable E3 ubiquitin-protein ligase RHC1A... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 8 39
IPR001841 Znf_RING 218 260
No external refs found!