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Aliases : PUB13, ATPUB13
Description : E3 ubiquitin ligase & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00052670 | PUB13, ATPUB13,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00086p00031680 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G23030 | No alias | ARM repeat superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G01830 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G42340 | PUB15 | Plant U-Box 15 | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10525.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65975.t1 | PUB8, B80,... | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000295 | No alias | not classified & original description: CDS=1-2304 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g09348 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g12067 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35890 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g07191 | PUB18, ATPUB18 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03347 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18007 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13754 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g00426 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g15239 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_84321g0010 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g20708 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17953 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26171 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g33345 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g19142 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo231208 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Smo415326 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06505 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
| No external refs found! |