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Aliases : CSP41A
Description : endoribonuclease *(CSP41) & original description: none
Gene families : OG0001864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001864_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00211760 | CRB, HIP1.3,... | RNA processing.organelle machineries.ribonuclease... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00246210 | CSP41A,... | RNA processing.organelle machineries.ribonuclease... | 0.12 | OrthoFinder output from all 47 species | |
| AT1G09340 | CRB, HIP1.3, CSP41B | chloroplast RNA binding | 0.15 | OrthoFinder output from all 47 species | |
| AT3G63140 | CSP41A | chloroplast stem-loop binding protein of 41 kDa | 0.14 | OrthoFinder output from all 47 species | |
| Adi_g006651 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Adi_g020154 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g04885 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g12109 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.15 | OrthoFinder output from all 47 species | |
| Als_g12366 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Als_g45562 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g01615 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g11448 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g13529 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aop_g69969 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene42964.t1 | CRB, HIP1.3,... | endoribonuclease *(CSP41) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene58991.t1 | CSP41A, Aspi01Gene58991 | endoribonuclease *(CSP41) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0699.g082607 | CSP41A | endoribonuclease *(CSP41) & original description: CDS=152-1396 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0754.g085340 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: CDS=1-1245 | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s1450.g103210 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: CDS=130-1254 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g10854 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g10933 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.11G048000.1 | CRB, HIP1.3,... | endoribonuclease *(CSP41) & original description:... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.26G018800.1 | CSP41A, Ceric.26G018800 | endoribonuclease *(CSP41) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021181.14 | CRB, HIP1.3, CSP41B | RNA processing.organelle machineries.ribonuclease... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021720.14 | CRB, HIP1.3, CSP41B | RNA processing.organelle machineries.ribonuclease... | 0.03 | OrthoFinder output from all 47 species | |
| Cre10.g435800 | CRB, HIP1.3, CSP41B | RNA processing.organelle machineries.ribonuclease... | 0.05 | OrthoFinder output from all 47 species | |
| Cre10.g440050 | CSP41A | RNA processing.organelle machineries.ribonuclease... | 0.09 | OrthoFinder output from all 47 species | |
| Dac_g08562 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g14747 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g01117 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g02729 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g02854 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g14746 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g01176 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g06718 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01011082001 | CSP41A | RNA processing.organelle machineries.ribonuclease... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01031272001 | CRB, HIP1.3, CSP41B | RNA processing.organelle machineries.ribonuclease... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_01706 | CSP41A | endoribonuclease (CSP41) | 0.09 | OrthoFinder output from all 47 species | |
| Gb_26565 | CRB, HIP1.3, CSP41B | endoribonuclease (CSP41) | 0.13 | OrthoFinder output from all 47 species | |
| Gb_37146 | CSP41A | Chloroplast stem-loop binding protein of 41 kDa a,... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g11110.1 | CSP41A, LOC_Os07g11110 | endoribonuclease (CSP41) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g23180.1 | CRB, HIP1.3,... | endoribonuclease (CSP41) | 0.11 | OrthoFinder output from all 47 species | |
| Len_g03236 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Len_g13543 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g01195 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g12178 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_115470g0010 | CSP41A | Chloroplast stem-loop binding protein of 41 kDa a,... | 0.08 | OrthoFinder output from all 47 species | |
| MA_196108g0010 | CRB, HIP1.3, CSP41B | endoribonuclease (CSP41) | 0.06 | OrthoFinder output from all 47 species | |
| MA_307070g0010 | CSP41A | endoribonuclease (CSP41) | 0.1 | OrthoFinder output from all 47 species | |
| MA_327596g0010 | CRB, HIP1.3, CSP41B | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g11680.1 | CRB, HIP1.3, CSP41B | endoribonuclease (CSP41) | 0.16 | OrthoFinder output from all 47 species | |
| Mp1g11690.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g11330.1 | CSP41A | endoribonuclease (CSP41) | 0.12 | OrthoFinder output from all 47 species | |
| Msp_g23904 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g36515 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Nbi_g04194 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Nbi_g07510 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g07930 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g19880 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g31893 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14125 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Pir_g14134 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g10254 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pnu_g13713 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01983 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g10001 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0076.g017534 | CSP41A | endoribonuclease *(CSP41) & original description: CDS=1450-2700 | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g04675 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g11377 | No alias | endoribonuclease *(CSP41) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g19736 | No alias | endoribonuclease *(CSP41) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g22990 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Smo107618 | CRB, HIP1.3, CSP41B | RNA processing.organelle machineries.ribonuclease... | 0.08 | OrthoFinder output from all 47 species | |
| Smo133157 | CSP41A | RNA processing.organelle machineries.ribonuclease... | 0.03 | OrthoFinder output from all 47 species | |
| Smo185868 | CSP41A | RNA processing.organelle machineries.ribonuclease... | 0.05 | OrthoFinder output from all 47 species | |
| Smo228849 | CRB, HIP1.3, CSP41B | RNA processing.organelle machineries.ribonuclease... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g073260.3.1 | CRB, HIP1.3,... | endoribonuclease (CSP41) | 0.12 | OrthoFinder output from all 47 species | |
| Solyc09g065180.3.1 | CSP41A, Solyc09g065180 | endoribonuclease (CSP41) | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g10009 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g12780 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Tin_g00898 | CRB, HIP1.3, CSP41B | endoribonuclease *(CSP41) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g08097 | CSP41A | endoribonuclease *(CSP41) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e029297_P001 | CRB, HIP1.3,... | endoribonuclease (CSP41) | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e033112_P001 | CSP41A, Zm00001e033112 | endoribonuclease (CSP41) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015252 | proton channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |