Dac_g35644 (At-SCL30A, SCL30A)

Aliases : At-SCL30A, SCL30A

Description : RNA splicing factor *(SCL28/30/33) & original description: none

Gene families : OG0001193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g35644

Target	Alias	Description	ECC score	Gene Family Method
Als_g08232	At-SCL30A, SCL30A	RNA splicing factor *(SCL28/30/33) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.17G037900.1	At-SCL30A,...	RNA splicing factor *(SCL28/30/33) & original...	0.03	OrthoFinder output from all 47 species
Cre13.g586916	At-SCL28, SCL28	RNA processing.RNA splicing.spliceosome-associated...	0.02	OrthoFinder output from all 47 species
Dcu_g08086	At-SCL30A, SCL30A	RNA splicing factor *(SCL28/30/33) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g14064	At-SCL30A, SCL30A	RNA splicing factor *(SCL28/30/33) & original description: none	0.02	OrthoFinder output from all 47 species
MA_122608g0010	At-SCL28, SCL28	SCL28/30/33 RNA splicing factor	0.02	OrthoFinder output from all 47 species
Ppi_g10815	At-SCL30A, SCL30A	RNA splicing factor *(SCL28/30/33) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	87	157

External Links

No external refs found!