Zm00001d016918 (GRMZM2G072146)

Aliases : GRMZM2G072146

Description : 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease Encodes a nuclear ubiquitin-specific protease. ubiquitin-specific protease 3 (UBP3)

Gene families : OG_01_0001820 (Gene family) Phylogenetic Tree(s): OG0001820_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Zm00001d016918
Cluster	HCCA cluster: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01004859001	No alias	29.5.11.5 protein.degradation.ubiquitin.ubiquitin...	0.04	Gene family
Smo153173	PACid_15420523	29.5.11.5 protein.degradation.ubiquitin.ubiquitin...	0.04	Gene family
Solyc01g105240.3.1	Solyc01g105240.3	29.5.11.5 protein.degradation.ubiquitin.ubiquitin...	0.02	Gene family
Zm00001d003476	GRMZM2G049568	29.5.11.5 protein.degradation.ubiquitin.ubiquitin...	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEA	InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	ubiquitinyl hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	67	400

External Links

No external refs found!

Zm00001d016918 (GRMZM2G072146)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation