Dac_g33091 (AGO1)

Aliases : AGO1

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: none

Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g33091

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00203090	AGO4, OCP11,...	Chromatin organisation.DNA methylation.canonical...	0.03	OrthoFinder output from all 47 species
Dac_g07779	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.04	OrthoFinder output from all 47 species
Ore_g30168	AGO1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009460	AGO1	regulatory protein *(AGO7) of transacting siRNA pathway...	0.03	OrthoFinder output from all 47 species
Solyc02g069270.2.1	AGO2, Solyc02g069270	siRNA-binding factor (AGO2) of non-canonical RdDM pathway	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032473	Argonaute_Mid_dom	634	708
IPR014811	ArgoL1	386	436
IPR032474	Argonaute_N	242	376
IPR032472	ArgoL2	577	623
IPR003100	PAZ_dom	441	563
IPR003165	Piwi	724	1037

External Links

No external refs found!