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  5. Dac_g33001

Dac_g33001


Description : SSU processome assembly factor *(UTP21) & original description: none


Gene families : OG0005878 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005878_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g33001

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021348.51 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre10.g466250 No alias No description available 0.01 OrthoFinder output from all 47 species
Zm00001e037473_P002 Zm00001e037473 SSU processome assembly factor (UTP21) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0032040 small-subunit processome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 468 503
IPR001680 WD40_repeat 549 586
IPR007319 SSU_processome_Utp21 720 939
IPR024977 Apc4_WD40_dom 191 277
No external refs found!